ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A044RKA0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A044RKA0_F1_nD1

A0A044RKA0_F1_nD1

UID: 003621982

AlphaFold

Range: 21-130
AlphaFold: AF-A0A044RKA0
UniProt: A0A044RKA0 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in Viral_Rep →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupOrigin of replication-binding domains(304.55.1)

FFamilyViral_Rep(304.55.1.5)

Pfam Families

PF02407Viral_Rep

Putative viral replication protein

ClanCL0169Rep

External Links

AlphaFold DB: A0A044RKA0 UniProt: A0A044RKA0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-130