ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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C1GPN5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1GPN5_F1_nD1

C1GPN5_F1_nD1

UID: 003631467

AlphaFold

Range: 301-415
AlphaFold: AF-C1GPN5
UniProt: C1GPN5 (all domains)
Gene: PAAG_00480

Protein: DNA damage and replication checkpoint protein Rfx1

3D Structure

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Related Domains

Browse other domains in RFX_DNA_binding →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRFX_DNA_binding(101.1.2.34)

Pfam Families

PF02257RFX_DNA_binding

RFX DNA-binding domain

ClanCL0123HTH

External Links

AlphaFold DB: C1GPN5 UniProt: C1GPN5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 301-415