ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0A2V3S0_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0A2V3S0_F1_nD4

A0A0A2V3S0_F1_nD4

UID: 003632056

AlphaFold

Range: 686-734
AlphaFold: AF-A0A0A2V3S0
UniProt: A0A0A2V3S0 (all domains)
Gene: PAAG_11074

Protein: Ubiquitin-60S ribosomal protein L40

3D Structure

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Related Domains

Browse other domains in Ribosomal_L40e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L40e(375.1.1.6)

Pfam Families

PF01020Ribosomal_L40e

Ribosomal L40e family

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: A0A0A2V3S0 UniProt: A0A0A2V3S0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 686-734