ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1GTA5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C1GTA5_F1_nD3

C1GTA5_F1_nD3

UID: 003632172

AlphaFold

Range: 26-540,691-1205
AlphaFold: AF-C1GTA5
UniProt: C1GTA5 (all domains)
Gene: VPS10

Protein: Vacuolar protein sorting/targeting protein 10 (Carboxypeptidase Y receptor) (CPY receptor) (Sortilin VPS10) (Vacuolar carboxypeptidase sorting receptor VPS10)

3D Structure

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Related Domains

Browse other domains in Sortilin-Vps10 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group10-bladed(5.1.7)

FFamilySortilin-Vps10(5.1.7.2)

Pfam Families

PF15902Sortilin-Vps10

Sortilin, neurotensin receptor 3,

ClanCL0186Beta_propeller

External Links

AlphaFold DB: C1GTA5 UniProt: C1GTA5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-540,691-1205