ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1H1Q9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1H1Q9_F1_nD1

C1H1Q9_F1_nD1

UID: 003632340

AlphaFold

Range: 46-140,191-205
AlphaFold: AF-C1H1Q9
UniProt: C1H1Q9 (all domains)
Gene: PAAG_04845

Protein: Transcription initiation factor IIF subunit beta (TFIIF medium subunit) (TFIIF-beta)

3D Structure

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Related Domains

Browse other domains in TFIIF_beta_N →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupRap30/74 interaction domains-like(59.1.1)

FFamilyTFIIF_beta_N(59.1.1.8)

Pfam Families

PF17683TFIIF_beta_N

TFIIF, beta subunit N-terminus

ClanCL0662Triple_barrel

External Links

AlphaFold DB: C1H1Q9 UniProt: C1H1Q9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-140,191-205