ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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C1H3C8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1H3C8_F1_nD1

C1H3C8_F1_nD1

UID: 003632357

AlphaFold

Range: 116-200,291-310,371-380
AlphaFold: AF-C1H3C8
UniProt: C1H3C8 (all domains)
Gene: PAAG_05271

Protein: Spt20-like SEP domain-containing protein

3D Structure

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Related Domains

Browse other domains in Spt20_SEP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupNSFL1 (p97 ATPase) cofactor p47, SEP domain(831)

HH-groupNSFL1 (p97 ATPase) cofactor p47, SEP domain(831.1)

TT-groupNSFL1 (p97 ATPase) cofactor p47, SEP domain(831.1.1)

FFamilySpt20_SEP(831.1.1.2)

Pfam Families

PF12090Spt20_SEP

Spt20, SEP domain

External Links

AlphaFold DB: C1H3C8 UniProt: C1H3C8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-200,291-310,371-380