ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1GQK9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1GQK9_F1_nD1

C1GQK9_F1_nD1

UID: 003633360

AlphaFold

Range: 56-110,136-259,281-305,341-390
AlphaFold: AF-C1GQK9
UniProt: C1GQK9 (all domains)
Gene: PAAG_00804

Protein: Endoplasmic reticulum-Golgi intermediate compartment protein

3D Structure

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Related Domains

Browse other domains in COPIIcoated_ERV,ERGIC_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupER-derived vesicles protein Erv41p lumenal domain(10.35)

TT-groupER-derived vesicles protein Erv41p lumenal domain(10.35.1)

FFamilyCOPIIcoated_ERV,ERGIC_N(10.35.1.1)

Pfam Families

PF07970COPIIcoated_ERV

Endoplasmic reticulum vesicle transporter

PF13850ERGIC_N

Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

External Links

AlphaFold DB: C1GQK9 UniProt: C1GQK9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-110,136-259,281-305,341-390