ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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C1HAE0_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/C1HAE0_F1_nD5

C1HAE0_F1_nD5

UID: 003634127

AlphaFold

Range: 626-680,811-880
UniProt: C1HAE0 (all domains)
Gene: PAAG_07594

Protein: ATP-dependent RNA helicase DOB1

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupHelical arch in Ski2-like helicases(3324)

HH-groupHelical arch in Ski2-like helicases(3324.1)

TT-groupHelical arch in Ski2-like helicases(3324.1.1)

FFamily(3324.1.1.2)

Pfam Families

PF13234MTR4_beta-barrel

Mtr4-like, beta-barrel domain

ClanCL0010SH3

PF21408MTR4-like_stalk

Exosome RNA helicase MTR4-like, stalk

External Links

UniProt: C1HAE0

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