ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1H5X9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1H5X9_F1_nD1

C1H5X9_F1_nD1

UID: 003635876

AlphaFold

Range: 31-125
AlphaFold: AF-C1H5X9
UniProt: C1H5X9 (all domains)
Gene: PAAG_06089

Protein: Ribosome assembly protein 4 (Notchless protein homolog 1) (Ribosome biogenesis factor RSA4)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyNLE(221.1.1.31)

Pfam Families

NLE (NUC135) domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: C1H5X9 UniProt: C1H5X9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-125