ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1H6E3_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/C1H6E3_F1_nD4

C1H6E3_F1_nD4

UID: 003636181

AlphaFold

Range: 416-485,661-705,806-1140
AlphaFold: AF-C1H6E3
UniProt: C1H6E3 (all domains)
Gene: PAAG_06334

Protein: Pre-mRNA-splicing factor

3D Structure

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Related Domains

Browse other domains in ResIII, AAA_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyResIII, AAA_11(2004.1.1.473)

Pfam Families

Type III restriction enzyme, res subunit

ClanCL0023P-loop_NTPase

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: C1H6E3 UniProt: C1H6E3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 416-485,661-705,806-1140