ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1H3P2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C1H3P2_F1_nD3

C1H3P2_F1_nD3

UID: 003636666

AlphaFold

Range: 551-665
AlphaFold: AF-C1H3P2
UniProt: C1H3P2 (all domains)
Gene: PAN3

Protein: PAN2-PAN3 deadenylation complex subunit PAN3 (PAB1P-dependent poly(A)-specific ribonuclease) (Poly(A)-nuclease deadenylation complex subunit 3) (PAN deadenylation complex subunit 3)

3D Structure

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Related Domains

Browse other domains in Pan3_PK →

Classification

AArchitecturealpha arrays(a.6)

XX-groupDimerization domain in caprin-1 and PAN3(1016)

HH-groupDimerization domain in caprin-1 and PAN3(1016.1)

TT-groupDimerization domain in caprin-1 and PAN3(1016.1.1)

FFamilyPan3_PK(1016.1.1.1)

Pfam Families

PF18101Pan3_CK

Pan3 C-terminal knob domain

External Links

AlphaFold DB: C1H3P2 UniProt: C1H3P2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 551-665