ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0A2V7A1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0A2V7A1_F1_nD1

A0A0A2V7A1_F1_nD1

UID: 003636879

AlphaFold

Range: 106-195
AlphaFold: AF-A0A0A2V7A1
UniProt: A0A0A2V7A1 (all domains)
Gene: PAAG_11168

Protein: U4/U6.U5 tri-snRNP-associated protein

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

AlphaFold DB: A0A0A2V7A1 UniProt: A0A0A2V7A1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-195