ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1HC86_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1HC86_F1_nD1

C1HC86_F1_nD1

UID: 003637570

AlphaFold

Range: 1-120
AlphaFold: AF-C1HC86
UniProt: C1HC86 (all domains)
Gene: PAAG_08377

Protein: Retrovirus-related Pol polyprotein from transposon TNT 1-94-like beta-barrel domain-containing protein

3D Structure

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Related Domains

Browse other domains in Pol_BBD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyPol_BBD(1.1.1.19)

Pfam Families

PF22936Pol_BBD

Pol polyprotein, beta-barrel domain

External Links

AlphaFold DB: C1HC86 UniProt: C1HC86

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-120