ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1GPF1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C1GPF1_F1_nD3

C1GPF1_F1_nD3

UID: 003637966

AlphaFold

Range: 226-350,376-395
AlphaFold: AF-C1GPF1
UniProt: C1GPF1 (all domains)
Gene: PAAG_00396

Protein: DNA-directed RNA polymerase I 49 kDa polypeptide

3D Structure

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Related Domains

Browse other domains in RNA_pol_I_A49 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNA_pol_I_A49(101.1.2.79)

Pfam Families

PF06870RNA_pol_I_A49

A49-like RNA polymerase I associated factor

ClanCL0662Triple_barrel

External Links

AlphaFold DB: C1GPF1 UniProt: C1GPF1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-350,376-395