ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1H1N9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C1H1N9_F1_nD2

C1H1N9_F1_nD2

UID: 003638109

AlphaFold

Range: 236-865,886-905
AlphaFold: AF-C1H1N9
UniProt: C1H1N9 (all domains)
Gene: PAAG_04825

Protein: MMS19 nucleotide excision repair protein

3D Structure

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Related Domains

Browse other domains in MMS19_C, MMS19_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyMMS19_C, MMS19_N(109.4.1.1589)

Pfam Families

PF12460MMS19_C

RNAPII transcription regulator C-terminal

ClanCL0020TPR

PF14500MMS19_N

Dos2-interacting transcription regulator of RNA-Pol-II

External Links

AlphaFold DB: C1H1N9 UniProt: C1H1N9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-865,886-905