ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1HBD5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C1HBD5_F1_nD3

C1HBD5_F1_nD3

UID: 003638499

AlphaFold

Range: 486-510,586-645
AlphaFold: AF-C1HBD5
UniProt: C1HBD5 (all domains)
Gene: PAAG_08076

Protein: RNA binding protein Nrd1

3D Structure

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Related Domains

Browse other domains in Nrd1-Seb1_dom2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupSeb1 domain 2(1157)

HH-groupSeb1 domain 2(1157.1)

TT-groupSeb1 domain 2(1157.1.1)

FFamilyNrd1-Seb1_dom2(1157.1.1.1)

Pfam Families

PF21380Nrd1-Seb1_dom2

Nrd1/Seb1, domain 2

External Links

AlphaFold DB: C1HBD5 UniProt: C1HBD5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 486-510,586-645