ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0A2VJC8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0A2VJC8_F1_nD4

A0A0A2VJC8_F1_nD4

UID: 003638591

AlphaFold

Range: 6-220,1101-1315
AlphaFold: AF-A0A0A2VJC8
UniProt: A0A0A2VJC8 (all domains)
Gene: PAAG_12326

Protein: DNA repair protein RAD50

3D Structure

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Related Domains

Browse other domains in AAA_23,SbcC_Walker_B →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_23,SbcC_Walker_B(2004.1.1.199)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

PF13558SbcC_Walker_B

SbcC/RAD50-like, Walker B motif

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A0A2VJC8 UniProt: A0A0A2VJC8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-220,1101-1315