ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1GTP1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C1GTP1_F1_nD2

C1GTP1_F1_nD2

UID: 003638961

AlphaFold

Range: 156-259,341-400
AlphaFold: AF-C1GTP1
UniProt: C1GTP1 (all domains)
Gene: PAAG_01886

Protein: Ribonuclease H2 subunit B (Ribonuclease HI subunit B)

3D Structure

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Related Domains

Browse other domains in RNase_H2-Ydr279 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNase_H2-Ydr279(101.1.2.113)

Pfam Families

PF09468RNase_H2-Ydr279

Ydr279p protein family (RNase H2 complex component) wHTH domain

ClanCL0123HTH

External Links

AlphaFold DB: C1GTP1 UniProt: C1GTP1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-259,341-400