ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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C1H067_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/C1H067_F1_nD4

C1H067_F1_nD4

UID: 003639215

AlphaFold

Range: 461-620
AlphaFold: AF-C1H067
UniProt: C1H067 (all domains)
Gene: PAAG_04161

Protein: Probable endonuclease LCL3 (Probable endonuclease lcl3)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupStaphylococcal nuclease(2.6)

TT-groupStaphylococcal nuclease(2.6.1)

FFamilySNase(2.6.1.1)

Pfam Families

Staphylococcal nuclease homologue

ClanCL0010SH3

External Links

AlphaFold DB: C1H067 UniProt: C1H067

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-620