ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1GUS5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1GUS5_F1_nD1

C1GUS5_F1_nD1

UID: 003639459

AlphaFold

Range: 6-85,121-180,226-320
AlphaFold: AF-C1GUS5
UniProt: C1GUS5 (all domains)
Gene: PAAG_02398

Protein: General transcription and DNA repair factor IIH subunit TFB4 (TFIIH subunit TFB4) (RNA polymerase II transcription factor B subunit 4)

3D Structure

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Related Domains

Browse other domains in Tfb4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupvWA-like(2006.1.6)

FFamilyTfb4(2006.1.6.5)

Pfam Families

Transcription factor Tfb4

ClanCL0128vWA-like

External Links

AlphaFold DB: C1GUS5 UniProt: C1GUS5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85,121-180,226-320