ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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C1H6E4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1H6E4_F1_nD1

C1H6E4_F1_nD1

UID: 003640027

AlphaFold

Range: 6-190
AlphaFold: AF-C1H6E4
UniProt: C1H6E4 (all domains)
Gene: PAAG_06335

Protein: Nuclear matrix protein

3D Structure

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Related Domains

Browse other domains in efThoc1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyefThoc1(109.4.1.543)

Pfam Families

PF11957efThoc1

THO complex subunit 1 transcription elongation factor

External Links

AlphaFold DB: C1H6E4 UniProt: C1H6E4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-190