ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1HCY2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1HCY2_F1_nD1

C1HCY2_F1_nD1

UID: 003640266

AlphaFold

Range: 16-70,91-120,186-218
AlphaFold: AF-C1HCY2
UniProt: C1HCY2 (all domains)
Gene: PAAG_08623

Protein: tRNA-splicing endonuclease subunit Sen15 domain-containing protein

3D Structure

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Related Domains

Browse other domains in Sen15 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-grouptRNA-intron endonuclease catalytic domain-like(2008.2)

TT-grouptRNA-intron endonuclease catalytic domain-like(2008.2.1)

FFamilySen15(2008.2.1.2)

Pfam Families

Sen15 protein

ClanCL0236PDDEXK

External Links

AlphaFold DB: C1HCY2 UniProt: C1HCY2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-70,91-120,186-218