ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1H1K8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1H1K8_F1_nD1

C1H1K8_F1_nD1

UID: 003640445

AlphaFold

Range: 236-265,506-875,1031-1250
AlphaFold: AF-C1H1K8
UniProt: C1H1K8 (all domains)
Gene: PAAG_04652

Protein: DNA repair protein RAD16

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom,Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom,Helicase_C(2004.1.1.24)

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: C1H1K8 UniProt: C1H1K8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-265,506-875,1031-1250