ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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C1GXX3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C1GXX3_F1_nD2

C1GXX3_F1_nD2

UID: 003640656

AlphaFold

Range: 111-175
AlphaFold: AF-C1GXX3
UniProt: C1GXX3 (all domains)
Gene: PAAG_03256

Protein: RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B 38 kDa subunit) (RNA polymerase II transcription factor B p38 subunit)

3D Structure

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Related Domains

Browse other domains in MAT1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyMAT1(386.1.1.10)

Pfam Families

CDK-activating kinase assembly factor MAT1

External Links

AlphaFold DB: C1GXX3 UniProt: C1GXX3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-175