ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C1HDV1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C1HDV1_F1_nD1

C1HDV1_F1_nD1

UID: 003640836

AlphaFold

Range: 116-415
AlphaFold: AF-C1HDV1
UniProt: C1HDV1 (all domains)
Gene: PAAG_08944

Protein: Protein PNG1 (Protein png1)

3D Structure

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Related Domains

Browse other domains in Transglut_core, Rad4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyTransglut_core, Rad4(219.1.1.111)

Pfam Families

PF01841Transglut_core

Transglutaminase-like superfamily

ClanCL0125Peptidase_CA

Rad4 transglutaminase-like domain

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: C1HDV1 UniProt: C1HDV1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-415