ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6HJL8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6HJL8_F1_nD4

A0A1D6HJL8_F1_nD4

UID: 003642620

AlphaFold

Range: 541-655
AlphaFold: AF-A0A1D6HJL8
UniProt: A0A1D6HJL8 (all domains)
Gene: ZEAMMB73_Zm00001d017964

Protein: RNA-dependent RNA polymerase (EC 2.7.7.48)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRdRP(1.1.2.11)

Pfam Families

RNA dependent RNA polymerase

External Links

AlphaFold DB: A0A1D6HJL8 UniProt: A0A1D6HJL8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-655