ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6LXF5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6LXF5_F1_nD1

A0A1D6LXF5_F1_nD1

UID: 003642713

AlphaFold

Range: 86-240
AlphaFold: AF-A0A1D6LXF5
UniProt: A0A1D6LXF5 (all domains)
Gene: ZEAMMB73_Zm00001d037391

Protein: Mediator of RNA polymerase II transcription subunit 36a

3D Structure

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Related Domains

Browse other domains in Fibrillarin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFibrillarin(2003.1.5.10)

Pfam Families

PF01269Fibrillarin

Fibrillarin

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A0A1D6LXF5 UniProt: A0A1D6LXF5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-240