ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6P5I1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6P5I1_F1_nD2

A0A1D6P5I1_F1_nD2

UID: 003643013

AlphaFold

Range: 176-280,306-360
AlphaFold: AF-A0A1D6P5I1
UniProt: A0A1D6P5I1 (all domains)
Gene: ZEAMMB73_Zm00001d046933

Protein: RNA-dependent RNA polymerase (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RDR6_2nd →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilyRDR6_2nd(220.1.1.182)

Pfam Families

PF24577RDR6_2nd

RNA-dependent RNA polymerase 6 second domain

ClanCL0266PH

External Links

AlphaFold DB: A0A1D6P5I1 UniProt: A0A1D6P5I1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-280,306-360