ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6Q5U4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6Q5U4_F1_nD1

A0A1D6Q5U4_F1_nD1

UID: 003645914

AlphaFold

Range: 16-55
AlphaFold: AF-A0A1D6Q5U4
UniProt: A0A1D6Q5U4 (all domains)
Gene: LOC100192866

Protein: Putative nuclear RNA export factor SDE5

3D Structure

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Related Domains

Browse other domains in UBA_At5g58720 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_At5g58720(103.1.1.87)

Pfam Families

PF24767UBA_At5g58720

At5g58720 UBA-like domain

ClanCL0214UBA

External Links

AlphaFold DB: A0A1D6Q5U4 UniProt: A0A1D6Q5U4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-55