ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O24591_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O24591_F1_nD1

O24591_F1_nD1

UID: 003647563

AlphaFold

Range: 1-95
AlphaFold: AF-O24591
UniProt: O24591 (all domains)
Gene: HDT1

Protein: Histone deacetylase HDT1 (Histone deacetylase 2a) (HD2a) (Nucleolar histone deacetylase HD2-p39) (Zm-HD2a)

3D Structure

Loading viewer...

Related Domains

Browse other domains in NPL →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyNPL(10.2.1.55)

Pfam Families

Nucleoplasmin-like domain

ClanCL0055Nucleoplasmin

External Links

AlphaFold DB: O24591 UniProt: O24591

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-95