ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6GJ36_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6GJ36_F1_nD4

A0A1D6GJ36_F1_nD4

UID: 003648531

AlphaFold

Range: 521-625
AlphaFold: AF-A0A1D6GJ36
UniProt: A0A1D6GJ36 (all domains)
Gene: LOC100384509

Protein: PHD finger protein MALE MEIOCYTE DEATH 1

3D Structure

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Related Domains

Browse other domains in Ubiquitin_At1g33420 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_At1g33420(221.1.1.167)

Pfam Families

PF25565Ubiquitin_At1g33420

At1g33420-like, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A1D6GJ36 UniProt: A0A1D6GJ36

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 521-625