ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1D6GAK2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6GAK2_F1_nD3

A0A1D6GAK2_F1_nD3

UID: 003649931

AlphaFold

Range: 301-485
AlphaFold: AF-A0A1D6GAK2
UniProt: A0A1D6GAK2 (all domains)
Gene: ZEAMMB73_Zm00001d012652

Protein: Signal recognition particle 54 kDa protein

3D Structure

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Related Domains

Browse other domains in SRP_SPB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySRP_SPB(101.1.1.19)

Pfam Families

PF02978SRP_SPB

Signal peptide binding domain

ClanCL0123HTH

External Links

AlphaFold DB: A0A1D6GAK2 UniProt: A0A1D6GAK2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 301-485