ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6M0H6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6M0H6_F1_nD1

A0A1D6M0H6_F1_nD1

UID: 003650481

AlphaFold

Range: 102-170
AlphaFold: AF-A0A1D6M0H6
UniProt: A0A1D6M0H6 (all domains)
Gene: ZEAMMB73_Zm00001d037785

Protein: T-complex protein 1 subunit epsilon

3D Structure

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Related Domains

Browse other domains in Retrotrans_gag →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyRetrotrans_gag(170.2.1.12)

Pfam Families

PF03732PEG10_N-capsid

Retrotransposon-derived protein PEG10, N-terminal capsid-like domain

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: A0A1D6M0H6 UniProt: A0A1D6M0H6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 102-170