ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3fyiA1 - ECOD Domain | ECOD

ECOD/Domains/e3fyiA1

e3fyiA1

UID: 000365659

PDB

Range: A:17-551
PDB: 3FYI chain A(all domains)
UniProt: P33517 (all domains)
Gene: ctaD

Molecule: Cytochrome c oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
COPPER (I) IONCU1
metal
Cyanide ionCYN

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 3FYI RCSB PDB: 3FYI PDBe: 3FYI UniProt: P33517

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Decyl-beta-d-maltopyranosideDMU

Heme-aHEA

Magnesium ionMG

metal

TridecaneTRD

Cadmium ionCD

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.