ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A1D6N407_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6N407_F1_nD3

A0A1D6N407_F1_nD3

UID: 003658052

AlphaFold

Range: 446-590
AlphaFold: AF-A0A1D6N407
UniProt: A0A1D6N407 (all domains)
Gene: LOC541683

Protein: Protein terminal ear1

3D Structure

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Related Domains

Browse other domains in RRM_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_2(304.9.1.9)

Pfam Families

RNA recognition motif 2

ClanCL0221RRM

External Links

AlphaFold DB: A0A1D6N407 UniProt: A0A1D6N407

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 446-590