ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1D6QF58_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6QF58_F1_nD4

A0A1D6QF58_F1_nD4

UID: 003659007

AlphaFold

Range: 391-470
AlphaFold: AF-A0A1D6QF58
UniProt: A0A1D6QF58 (all domains)
Gene: ZEAMMB73_Zm00001d052298

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupAriadne-1 protein homolog(376.1.4)

FFamilyIBR(376.1.4.1)

Pfam Families

IBR domain, a half RING-finger domain

ClanCL0229RING

External Links

AlphaFold DB: A0A1D6QF58 UniProt: A0A1D6QF58

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 391-470