ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C0HIM9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C0HIM9_F1_nD2

C0HIM9_F1_nD2

UID: 003660165

AlphaFold

Range: 41-175,226-410
AlphaFold: AF-C0HIM9
UniProt: C0HIM9 (all domains)
Gene: LOC100158231

Protein: Isopentenyl transferase1

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyIPPT(2004.1.1.71)

Pfam Families

IPP transferase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: C0HIM9 UniProt: C0HIM9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-175,226-410