ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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A0A1D6NE29_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6NE29_F1_nD3

A0A1D6NE29_F1_nD3

UID: 003662357

AlphaFold

Range: 421-465,486-840
AlphaFold: AF-A0A1D6NE29
UniProt: A0A1D6NE29 (all domains)

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

AlphaFold DB: A0A1D6NE29 UniProt: A0A1D6NE29

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 421-465,486-840