ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3djfB1 - ECOD Domain | ECOD

ECOD/Domains/e3djfB1

e3djfB1

UID: 000366492

PDB

Range: B:4-287
PDB: 3DJF chain B(all domains)
UniProt: Q9BMI9 (all domains)

Molecule: Purine-nucleoside phosphorylase

3D Structure

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Related Domains

Browse other domains in PNP_UDP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupPeptidyl-tRNA hydrolase-like(2011.2)

TT-groupPeptidyl-tRNA hydrolase-like(2011.2.1)

FFamilyPNP_UDP_1(2011.2.1.1)

Ligands

in contact, ≤ 4 Å

PeldesineBC3
drugDrugBank DB02568

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer.

Pfam Families

PF01048PNP_UDP_1

Phosphorylase superfamily

ClanCL0408PUP

External Links

ECOD PDB View: 3DJF RCSB PDB: 3DJF PDBe: 3DJF UniProt: Q9BMI9

Downloads

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Drug annotations from DrugDomain.