ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1D6GYQ1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6GYQ1_F1_nD3

A0A1D6GYQ1_F1_nD3

UID: 003666585

AlphaFold

Range: 202-265,316-360
AlphaFold: AF-A0A1D6GYQ1
UniProt: A0A1D6GYQ1 (all domains)
Gene: ZEAMMB73_Zm00001d015009

Protein: Autophagy protein 5

3D Structure

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Related Domains

Browse other domains in ATG5_UblB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyATG5_UblB(221.1.1.24)

Pfam Families

PF04106ATG5_UblB

Autophagy protein ATG5, UblB domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A1D6GYQ1 UniProt: A0A1D6GYQ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 202-265,316-360