ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6M5W5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6M5W5_F1_nD1

A0A1D6M5W5_F1_nD1

UID: 003670113

AlphaFold

Range: 36-45,106-185
AlphaFold: AF-A0A1D6M5W5
UniProt: A0A1D6M5W5 (all domains)
Gene: ZEAMMB73_Zm00001d038377

Protein: PIF/Ping-Pong transposase family protein

3D Structure

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Related Domains

Browse other domains in HTH_Tnp_4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_Tnp_4(101.1.1.129)

Pfam Families

PF13613HTH_Tnp_4

Helix-turn-helix of DDE superfamily endonuclease

ClanCL0123HTH

External Links

AlphaFold DB: A0A1D6M5W5 UniProt: A0A1D6M5W5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-45,106-185