ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D6M5W5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6M5W5_F1_nD2

A0A1D6M5W5_F1_nD2

UID: 003670118

AlphaFold

Range: 186-390,416-435
AlphaFold: AF-A0A1D6M5W5
UniProt: A0A1D6M5W5 (all domains)
Gene: ZEAMMB73_Zm00001d038377

Protein: PIF/Ping-Pong transposase family protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in DDE_Tnp_4 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDDE_Tnp_4(2484.1.1.120)

Pfam Families

PF13359DDE_Tnp_4

DDE superfamily endonuclease

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A1D6M5W5 UniProt: A0A1D6M5W5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-390,416-435