ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B4FHK5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B4FHK5_F1_nD1

B4FHK5_F1_nD1

UID: 003671585

AlphaFold

Range: 1-85
AlphaFold: AF-B4FHK5
UniProt: B4FHK5 (all domains)
Gene: LOC100194136

Protein: NPL4 family protein (NPL4-like protein 1)

3D Structure

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Related Domains

Browse other domains in OTU1_UBXL →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyOTU1_UBXL(221.1.1.70)

Pfam Families

PF21403OTU1_UBXL

OTU1, UBXL domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: B4FHK5 UniProt: B4FHK5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85