ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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C0P342_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C0P342_F1_nD1

C0P342_F1_nD1

UID: 003674986

AlphaFold

Range: 41-125
AlphaFold: AF-C0P342
UniProt: C0P342 (all domains)
Gene: LOC100276675

Protein: Protein UPSTREAM OF FLC

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilySOK(221.1.1.28)

Pfam Families

SOSEKI protein DIX-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: C0P342 UniProt: C0P342

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-125