ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D6PUT5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6PUT5_F1_nD1

A0A1D6PUT5_F1_nD1

UID: 003675309

AlphaFold

Range: 1-260,296-305,806-815
AlphaFold: AF-A0A1D6PUT5
UniProt: A0A1D6PUT5 (all domains)
Gene: ZEAMMB73_Zm00001d049449

Protein: 5'-3' exoribonuclease (EC 3.1.13.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in XRN_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyXRN_N(2006.1.4.5)

Pfam Families

XRN 5'-3' exonuclease N-terminus

ClanCL0280PIN

External Links

AlphaFold DB: A0A1D6PUT5 UniProt: A0A1D6PUT5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-260,296-305,806-815