ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B4FAN8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/B4FAN8_F1_nD5

B4FAN8_F1_nD5

UID: 003676009

AlphaFold

Range: 226-235,281-340,371-430,456-508
AlphaFold: AF-B4FAN8
UniProt: B4FAN8 (all domains)
Gene: LIM3

Protein: LIM transcription factor (Ubiquitin receptor1)

3D Structure

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Related Domains

Browse other domains in DA1-like →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyDA1-like(2498.1.1.51)

Pfam Families

PF12315DA1-like

Protein DA1

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: B4FAN8 UniProt: B4FAN8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-235,281-340,371-430,456-508