ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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B4F8B1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B4F8B1_F1_nD1

B4F8B1_F1_nD1

UID: 003679675

AlphaFold

Range: 1-85
AlphaFold: AF-B4F8B1
UniProt: B4F8B1 (all domains)
Gene: LOC118474708

Protein: Transcription elongation factor

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupConserved domain common to transcription factors TFIIS, elongin A, CRSP70(611.3)

TT-groupConserved domain common to transcription factors TFIIS, elongin A, CRSP70(611.3.1)

FFamilyMed26(611.3.1.1)

Pfam Families

TFIIS helical bundle-like domain

External Links

AlphaFold DB: B4F8B1 UniProt: B4F8B1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85