ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A1D6JMS4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6JMS4_F1_nD2

A0A1D6JMS4_F1_nD2

UID: 003680610

AlphaFold

Range: 236-405,431-525
AlphaFold: AF-A0A1D6JMS4
UniProt: A0A1D6JMS4 (all domains)
Gene: LOC100502264

Protein: Polynucleotide adenylyltransferase family protein

3D Structure

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Related Domains

Browse other domains in PolyA_pol_RNAbd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupPoly A polymerase C-terminal region-like(131.2)

TT-groupPoly A polymerase C-terminal region-like(131.2.1)

FFamilyPolyA_pol_RNAbd(131.2.1.3)

Pfam Families

PF12627PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

External Links

AlphaFold DB: A0A1D6JMS4 UniProt: A0A1D6JMS4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-405,431-525