ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A1D6EF52_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6EF52_F1_nD5

A0A1D6EF52_F1_nD5

UID: 003681053

AlphaFold

Range: 221-340,366-485,546-665,741-1004
AlphaFold: AF-A0A1D6EF52
UniProt: A0A1D6EF52 (all domains)
Gene: ZEAMMB73_Zm00001d004396

Protein: Vacuolar protein sorting-associated protein 54 chloroplastic

3D Structure

Loading viewer...

Related Domains

Browse other domains in Vps54 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps54(109.4.1.514)

Pfam Families

Vps54-like protein

External Links

AlphaFold DB: A0A1D6EF52 UniProt: A0A1D6EF52

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 221-340,366-485,546-665,741-1004