ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A1D6HH84_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A1D6HH84_F1_nD4

A0A1D6HH84_F1_nD4

UID: 003681109

AlphaFold

Range: 561-655
AlphaFold: AF-A0A1D6HH84
UniProt: A0A1D6HH84 (all domains)
Gene: LOC100382871

Protein: Protein ORGANELLE TRANSCRIPT PROCESSING 51

3D Structure

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Related Domains

Browse other domains in LAGLIDADG_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_2(242.1.1.2)

Pfam Families

PF03161LAGLIDADG_2

LAGLIDADG DNA endonuclease family

ClanCL0324Homing_endonuc

External Links

AlphaFold DB: A0A1D6HH84 UniProt: A0A1D6HH84

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-655